Query (optional)   in Class  

GrainGenes Marker Report: Xgwm357-1A

[Submit comment/correction]

Locus
Xgwm357-1A
Type
Microsatellite
Chromosome
1A
Chromosome Arm
1AL
1AS
Map
[ Hide all but 1 of 8 ]
Chinese_Spring_Deletion_SSR_1A0.39
Ta-SSR-2004-1A51.6
Ta-Synthetic/Opata-BARC-1A48.2
Ta-Synthetic/Opata-GPW-1A53.3
Ta-Synthetic/Opata-SSR-1A54
Triticum-AxF-1A54.6
Tturgidum-SSR-1A7.3
USG3209/Jaypee-1A86
[ Show Nearby Loci ]
Breakpoint Interval
1AL1-0.17-0.61
Map Data
T. turgidum, Messapia x dicoccoides, SSR
[ Show all 8 ]
Species
Triticum aestivum
Probe
WMS357
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferencePaillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Possible Orthologs
Xgwm357
gwm357
gwm357-1A



Probe for Locus
WMS357
Locus
Xgwm357-1A
Xgwm357
gwm357
gwm357-1A
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GA)18
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' TATGGTCAAAGTTGGACCTCG 3'
5' AGGCTGCAGCTCTTCTTCAG 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS357
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring