GrainGenes Marker Report: Xgwm371-5B
Locus
Xgwm371-5B
Type
Microsatellite
Chromosome
5B
Chromosome Arm
5BL
Map
Chinese_Spring_Deletion_SSR_5B 0.65
[ Show all 8 ]
[ Show Nearby Loci ]
Breakpoint Interval
5BL1-0.55-0.75
Map Data
Durum wheat, Kofa x UC1113
[ Show all 8 ]
Species
Triticum aestivum
Probe
WMS371
Reference
Data Source
Roeder, Marion S. 98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-5B, the interval most likely to contain locus is between Xbcd1140 and Xgwm499
Possible Orthologs
Xgwm371
[ Show all 6 ]
Probe for Locus
WMS371
Locus
[ Hide all but 1 of 7 ] Xgwm371-5B Xgwm371 Xgwm371-5D Xgwm371-5B.2 Xgwm371-5B.1 gwm371 gwm371-5B
Reference
Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (CA)10(GA)32 PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR SSR
PCR primers
5' GACCAAGATATTCAAACTGGCC 3'
5' AGCTCAGCTTGCTTGGTACC 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS371
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
GrainGenes Marker Report: Xgwm371-5B
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