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GrainGenes Marker Report: Xgwm372-2A

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Locus
Xgwm372-2A
Type
Microsatellite
Chromosome
2A
Chromosome Arm
2AS
Map
Chinese_Spring_Deletion_SSR_2A-0.39
[ Show all 7 ]
[ Show Nearby Loci ]
Breakpoint Interval
C-2AS5-0.78
Map Data
[ Hide all but 1 of 8 ]
Durum wheat, Svevo x Ciccio
T. turgidum, Messapia x dicoccoides, SSR
Wheat, Arina x Forno
Wheat, Consensus SSR, 2004
Wheat, Physical, SSR
Wheat, Synthetic x Opata, BARC
Wheat, Synthetic x Opata, GPW
Wheat, Synthetic x Opata, SSR
Species
Triticum aestivum
Probe
WMS372
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferencePaillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-2A, the interval most likely to contain locus is between Xbcd1184 and Xbcd152
Possible Orthologs
Xgwm372
[ Show all 6 ]
Probe for Locus
WMS372
Locus
Xgwm372
[ Show all 7 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GA)>51
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' AATAGAGCCCTGGGACTGGG 3'
5' GAAGGACGACATTCCACCTG 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS372
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring