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GrainGenes Marker Report: Xgwm389-3B

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Locus
Xgwm389-3B
Type
Microsatellite
Chromosome
3B
Chromosome Arm
3BS
Map
Chinese_Spring_Deletion_SSR_3B-0.675
[ Show all 18 ]
[ Show Nearby Loci ]
Breakpoint Interval
3BS-3/Telomere
3BS9-0.57-0.78
Map Data
[ Hide all but 1 of 19 ]
Durum wheat, Kofa x UC1113
Durum wheat, Svevo x Ciccio
T. turgidum, JK x Cham1
T. turgidum, JK x Cham1, 2
T. turgidum, Messapia x dicoccoides, SSR
Wheat, Arina x Forno
Wheat, Conan x Reeder
Wheat, Consensus SSR, 2004
Wheat, FHB QTL, Physical
Wheat, NxB, FHB QTL
Wheat, NxC, FHB QTL
Wheat, Physical, SSR
Wheat, Sphaerococcoid Genes
Wheat, SxS, FHB QTL, 2003
Wheat, Synthetic x Opata, BARC
Wheat, Synthetic x Opata, GPW
Wheat, Synthetic x Opata, SSR
Wheat, Synthetic x Opata, update
Wheat, WxM, FHB QTL
Species
Triticum aestivum
Probe
WMS389
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
[ Show all 7 ]
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-3B, the interval most likely to contain locus is between Xbcd907 and Xgwm533.1
Possible Orthologs
gwm389
Xgwm389
gwm389-3B
gwm389-3A


Probe for Locus
WMS389
Locus
Xgwm389-3B
[ Show all 6 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (CT)14(GT)16
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' ATCATGTCGATCTCCTTGACG 3'
5' TGCCATGCACATTAGCAGAT 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS389
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring