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GrainGenes Marker Report: Xgwm44-7D

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Locus
Xgwm44-7D
Type
Microsatellite
Chromosome
7D
Chromosome Arm
7DS
Map
Chinese_Spring_Deletion_SSR_7D-0.805
[ Show all 11 ]
[ Show Nearby Loci ]
QTL with Locus Marker
QLtn.sfr-7D
Breakpoint Interval
7DS4-0.61-1.00
Map Data
[ Hide all but 1 of 11 ]
Wheat, 2002, coleoptile color
Wheat, Arina x Forno
Wheat, Conan x Reeder
Wheat, Consensus SSR, 2004
Wheat, Forno x Oberkulmer
Wheat, Louise x Penawawa
Wheat, Physical, SSR
Wheat, Synthetic x Opata, BARC
Wheat, Synthetic x Opata, GPW
Wheat, Synthetic x Opata, SSR
Wheat, Synthetic x Opata, SSR 2
Species
Triticum aestivum
Probe
WMS44
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferencePaillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
ReferenceRoeder MS et al. (1995) Abundance, variability and chromosomal location of microsatellites in wheat. Molecular and General Genetics 246:327-333.
Data Source
Roeder, Marion S.98.09.15
Possible Orthologs
Xgwm44
Xgwm44-4A
gwm44
gwm44-4A



Probe for Locus
WMS44
Locus
Xgwm44-7D
[ Show all 6 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
ReferenceRoeder MS et al. (1995) Abundance, variability and chromosomal location of microsatellites in wheat. Molecular and General Genetics 246:327-333.
General Remarks
Insert contains repeat (GA)28
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Repeat type (GA)x28.
Product size 182 bp in Chinese Spring.
Type
PCR
SSR
PCR primers
5' GTTGAGCTTTTCAGTTCGGC 3'
5' ACTGGCATCCACTGAGCTG 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS44
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring