GrainGenes Marker Report: Xgwm47-2A.1
Locus
Xgwm47-2A.1
Type
Microsatellite
Chromosome
2A
Chromosome Arm
2AL
Map
Ta-Synthetic/Opata-BARC-2A 86.2 Ta-Synthetic/Opata-GPW-2A 130.9 Ta-Synthetic/Opata-SSR-2A 113.8 Tturgidum-JKxC-2A 6 Tturgidum-JKxC2-2A 34.8
[ Show Nearby Loci ]
Map Data
T. turgidum, JK x Cham1
[ Show all 6 ]
Probe
WMS47
Reference
Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S. 98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-2A, the intervals most likely to contain locus are Xbcd543 - XksuE16 or XksuE16 - Xpsr934
Possible Orthologs
gwm47
[ Show all 14 ]
Probe for Locus
WMS47
Locus
[ Hide all but 1 of 16 ] Xgwm47-2A.2 Xgwm47-2A.1 Xgwm47-2B Xgwm47-5A Xgwm47.3 Xgwm47.1 Xgwm47.4 Xgwm47.2 Xgwm47b Xgwm47 Xgwm47-2A Sr9a gwm47 gwm47-2A gwm47-2B gwm47-5A
Reference
General Remarks
Insert contains repeat (CT)7TT(CT)16 PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER. Repeats type (CT)x7TT(CT)x16. Product size 166 bp in Chinese Spring.
Type
PCR SSR
PCR primers
5' TTGCTACCATGCATGACCAT 3'
5' TTCACCTCGATTGAGGTCCT 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS47
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
GrainGenes Marker Report: Xgwm47-2A.1
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