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GrainGenes Marker Report: Xgwm518-6B

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Locus
Xgwm518-6B
Type
Microsatellite
Chromosome
6B
Chromosome Arm
6BS
Map
Chinese_Spring_Deletion_SSR_6B-1.275
[ Show all 8 ]
[ Show Nearby Loci ]
QTL with Locus Marker
Qtgw.ica-6BS
Breakpoint Interval
6BS-Sat
Map Data
[ Hide all but 1 of 8 ]
T. turgidum, Messapia x dicoccoides, SSR
T. turgidum, Omrabi5 x dicoccoides, QTL
Wheat, Arina x Forno
Wheat, Consensus SSR, 2004
Wheat, Physical, SSR
Wheat, Synthetic x Opata, BARC
Wheat, Synthetic x Opata, GPW
Wheat, Synthetic x Opata, SSR
Species
Triticum aestivum
Probe
WMS518
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferencePaillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-6B, the interval most likely to contain locus is between Xrz995 and XksuH4
Possible Orthologs
Xgwm518
[ Show all 7 ]
Probe for Locus
WMS518
Locus
Xgwm518
[ Show all 8 ]
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (CA)34
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' AATCACAACAAGGCGTGACA 3'
5' CAGGGTGGTGCATGCAT 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS518
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring