GrainGenes Marker Report: Xgwm639-5D
Locus
Xgwm639-5D
Type
Microsatellite
Chromosome
5D
Map
Chinese_Spring_Deletion_SSR_5D 0.3
[ Show all 6 ]
[ Show Nearby Loci ]
Breakpoint Interval
C-5DL1-0.60
Map Data
[ Hide all but 1 of 6 ] Wheat, Consensus SSR, 2004 Wheat, Grandin x BR34 Wheat, Physical, SSR Wheat, Synthetic x Opata, BARC Wheat, Synthetic x Opata, GPW Wheat, Synthetic x Opata, SSR
Probe
WMS639
Reference
Data Source
Roeder, Marion S. 98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-5D, the interval most likely to contain locus is between Xcdo57 and Xgwm583
Possible Orthologs
Xgwm639
[ Show all 20 ]
Probe for Locus
WMS639
Locus
Xgwm639.1-5A
[ Show all 23 ]
Reference
Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GA)19 PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR SSR
PCR primers
5' CTCTCTCCATTCGGTTTTCC 3'
5' CATGCCCCCCTTTTCTG 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS639
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
GrainGenes Marker Report: Xgwm639-5D
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