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GrainGenes Marker Report: Xgwm642-1D

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Locus
Xgwm642-1D
Type
Microsatellite
Chromosome
1D
Chromosome Arm
1DL
Map
[ Hide all but 1 of 8 ]
Chinese_Spring_Deletion_SSR_1D0.705
CS/SQ1-1D137.3
P91193D1/P92201D5-1D70.1
Ta-SSR-2004-1D75.4
Ta-Synthetic/Opata-BARC-1D76.3
Ta-Synthetic/Opata-GPW-1D104.1
Ta-Synthetic/Opata-SSR-1D125.15
Triticum-AxF-1D91.9
[ Show Nearby Loci ]
Breakpoint Interval
1DL2-0.41-1.00
Map Data
Wheat, Arina x Forno
[ Show all 8 ]
Species
Triticum aestivum
Probe
WMS642
Reference
ReferenceSomers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
ReferencePaillard S et al. (2003) An integrative genetic linkage map of winter wheat (Triticum aestivum L.) Theoretical and Applied Genetics 107:1235-1242.
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
Data Source
Roeder, Marion S.98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-1D, the intervals most likely to contain locus are XksuG55 - XksuG2 or XksuG2 - Xbcd1930
Possible Orthologs
Xgwm642
gwm642-1D
gwm642


Probe for Locus
WMS642
Locus
Xgwm642-1D
Xgwm642
gwm642-1D
gwm642
Reference
ReferenceRoder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (GT)14
PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR
SSR
PCR primers
5' ACGGCGAGAAGGTGCTC 3'
5' CATGAAAGGCAAGTTCGTCA 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 60 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS642
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring