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GrainGenes Marker Report: Xpsr115(Pk)

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Locus	Xpsr115(Pk)
Type	RFLP
Chromosome	5D
Chromosome Arm	5DL
Map	Oat-2002-OxT-QTL_31 138.5 Ta-Physical-Gill-5ABD 93 Ta-Physical-Gill-5D 5.14
	[ Show Nearby Loci ]
Breakpoint Interval	5DL-5/0 5L-0.85-1.00
Map Data	Oat-2002-OxT-QTL Wheat, Physical
Species	Triticum aestivum
Probe	PSR115
Candidate Gene	Pk
Reference	Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Possible Orthologs	psr115 [ Show all 12 ]
Probe for Locus	PSR115
Locus	Xpsr115(Prk)-4A [ Show all 18 ]
General Remarks	Polymorphism scores are given as the percent polymorphic pairwise comparisons, followed by the number of alleles found and number of varieties tested in parentheses.
Type	cDNA
Sequence	PSR115 Forward PSR115 Reverse
Copy Number	1
Background	1
Cross hybridizes to	Secale cereale good Hordeum vulgare good
Polymorphism	[ Hide all but 1 of 18 ] PSR115 H EcoRI 29.5 (3, 13) PSR115 H EcoRV 41.7 (3, 9) PSR115 H DraI 83.3 (3, 4) PSR115 H HindIII 60.3 (3, 13) PSR115 5B HindIII 5B 56.2 (3, 15) PSR115 4A HindIII 4A 0.0 (1, 15) PSR115 5D HindIII 5D 0.0 (1, 15) PSR115 4A EcoRI 4A 44.0 (2, 14) PSR115 5D EcoRI 5D 16.7 (2, 12) PSR115 5B EcoRI 5B 0.0 (1, 13) PSR115 5D EcoRV 5D 0.0 (1, 12) PSR115 4A EcoRV 4A 35.6 (2, 10) PSR115 5B EcoRV 5B 18.2 (2, 11) PSR115 4A DraI 4A 16.7 (2, 12) PSR115 5D DraI 5D 0.0 (1, 12) PSR115 5B DraI 5B 0.0 (1, 14) PSR115 R EcoRI PSR115 R HindIII
Gel	PSR115 Gale
Linkage Group	5BL 5DL 5HS 4AL 7RS
Source Species	Triticum aestivum
Source Germplasm	Chinese Spring
Source Tissue	Leaf
Insert Size	1.4