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GrainGenes Marker Report: Xpsr130-2B

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Locus
Xpsr130-2B
Type
RFLP
Chromosome
2B
Chromosome Arm
2BS
Map
Ta-Gale-2B-13.8
[ Show Nearby Loci ]
Map Data
Wheat, Gale
Species
Triticum aestivum
Probe
PSR130
Reference
ReferenceDevos KM et al. (1993) Comparative RFLP maps of the homoeologous group-2 chromosomes of wheat, rye and barley Theoretical and Applied Genetics 85:784-792.
ReferenceSharp PJ and Soltes-Rak E (1988) Homoeologous relationships between wheat group 2 chromosome arms as determined by RFLP analysis. Proceedings of the 7th International Wheat Genetics Symposium 645-637.
Data Source
Gale, Michael D.97.10
Possible Orthologs
Xpsr130
[ Show all 6 ]
Probe for Locus
PSR130
Locus
Xpsr130-2A
[ Show all 7 ]
Synonym
SynonymHAR35_15357
Related Probe
PSR122
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
General Remarks
Polymorphism scores are given as the percent polymorphic pairwise comparisons, followed by the number of alleles found and number of varieties tested in parentheses.
Type
cDNA
Sequence
PSR130
Copy Number
1
Background
3
Cross hybridizes to
Secale cerealegood
Hordeum vulgaregood
Polymorphism
[ Hide all but 1 of 18 ]
PSR130 H EcoRI52.4 (3, 7)
PSR130 H EcoRV47.3 (3, 11)
PSR130 H DraI100.0 (2, 2)
PSR130 H HindIII34.5 (3, 11)
PSR130 2B EcoRI2B 51.3 (2, 13)
PSR130 2D EcoRI2D 64.1 (19, 13)
PSR130 2A EcoRV2A 0.0 (1, 6)
PSR130 2D EcoRV2D 69.2 (3, 14)
PSR130 2B EcoRV2B 24.8 (2, 15)
PSR130 2B DraI2B 42.9 (2, 8)
PSR130 2A DraI2A 0.0 (1, 10)
PSR130 2D DraI2D 60.0 (2, 5)
PSR130 2D HindIII2D 51.4 (2, 15)
PSR130 2B HindIII2B 34.3 (2, 15)
PSR130 2A HindIII2A 13.3 (2, 15)
PSR130 R EcoRI
PSR130 R EcoRV
PSR130 R HindIII
Gel
PSR130 Gale
Linkage Group
2AS
2BS
2DS
2RS
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Source Tissue
Leaf
Insert Size
0.4