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GrainGenes Marker Report: cdo1090c

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Locus	cdo1090c
Type	RFLP
Map	Oat-2002-OxT-QTL_2 61 [ Show all 6 ]
	[ Show Nearby Loci ]
Map Data	Oat, KxO, 2003 [ Show all 6 ]
Probe	CDO1090
Homology	CAA67191.1 e-value: 2e-12 (X98582) HSP80-2 [Triticum aestivum] HS82_ORYSA e-value: 1e-43 HEAT SHOCK PROTEIN 82
Remark	Marker placement value = 0.00 cM on map Oat-KxO/2003-11_41+20 Marker is a framework marker on map Oat-KxO/2003-11_41+20
Possible Orthologs	[ Hide all but 1 of 20 ] cdo1090 cdo1090a cdo1090b cdo1090d cdo1090e Xcdo1090-2A Xcdo1090-2B Xcdo1090-5A Xcdo1090-6A Xcdo1090A Xcdo1090B Xcdo1090C Xcdo1090D Xcdo1090E CDO1090E CDO1090C CDO1090B CDO1090D CDO1090A cdo1090x
Probe for Locus	CDO1090
Locus	Xcdo1090-2A [ Show all 21 ]
Related Probe	CDO57
	Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference	Wight CP et al. (2004) Discovery, localization, and sequence characterization of molecular markers for the crown rust resistance genes Pc38, Pc39, and Pc48 in cultivated oat (Avena sativa L.) Molecular Breeding 14:349-361. Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Uni-ZAP XR library
Type	cDNA
Sequence	BE439335 BE439366 CDO1090_WHE05F10.s1 CN180767
Polymorphism	CDO1090 EcoRV CDO1090 XbaI CDO1090 EcoRI CDO1090 HindIII CDO1090 DraI
Source Species	Avena sativa
Source Germplasm	Brooks (oat)
Source Tissue	etiolated leaf
PCR size	0.9