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GrainGenes Marker Report: cdo113s

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Locus	cdo113s
Type	SCAR
Map	Oat-2004-P48xP38_1 0 Oat-2009-MxN-RGA_MN3 31.9 Oat-2010-MxN_3 47.9 Oat-2013-MxN-RGA_MN3 47.9 Oat-MxN_2005-3 31.9
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Map Data	Oat, MxN, genetic 2005 Oat-2004-P48xP38 Oat-2009-MxN-RGA Oat-2010-MxN_PcQTL Oat-2013-MxN-RGA
Species	Avena sativa
Probe	CDO113S
Reference	Wight CP et al. (2004) Discovery, localization, and sequence characterization of molecular markers for the crown rust resistance genes Pc38, Pc39, and Pc48 in cultivated oat (Avena sativa L.) Molecular Breeding 14:349-361.
Remark	The 's' in the locus and probe records indicate this to be a SCAR marker, i.e. Sequence Characterized Amplified Region, that was developed from the RFLP marker
Possible Orthologs	[ Hide all but 1 of 9 ] aCDO113 CDO113 CDO113A CDO113B CDO113b-3H Xcdo113 Xcdo113-3 Xcdo113-3A Xcnl.CDO113
Probe for Locus	CDO113S
Locus	cdo113s
Reference	Wight CP et al. (2004) Discovery, localization, and sequence characterization of molecular markers for the crown rust resistance genes Pc38, Pc39, and Pc48 in cultivated oat (Avena sativa L.) Molecular Breeding 14:349-361. Larson SR et al. (1996) Evaluation of barley chromosome-3 yield QTLs in a backcross F2 population using STS-PCR. Theoretical and Applied Genetics 93:618-625.
General Remarks	Termed a SCAR (Sequence Characterized Amplified Region) marker in original publication
Type	STS
Source Species	Avena sativa