GrainGenes Marker Report: cdo1319a
Locus
cdo1319a
Type
RFLP
Map
Oat-2001-KxM_3 32 Oat-2002-KxO_3_38 92 Oat-KxO/2003-3+38 81.3 RGA-2013_KO3_38 81
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003 Oat-2001-KxM Oat-2002-KxO Oat-2013-KxO-RGA
Probe
CDO1319
Homology
BAB10259.1 e-value: 4e-19 (AB025632) contains similarity to sorting nexin~gene_id:MQJ2.4 [Arabidopsis thaliana] BAB10259.1 e-value: 1e-18 (AB025632) contains similarity to sorting nexin~gene_id:MQJ2.4 [Arabidopsis thaliana]
Remark
Marker placement value = 0.00 cM on map Oat-KxO/2003-3+38 Marker is a framework marker on map Oat-KxO/2003-3+38
Possible Orthologs
cdo1319b
[ Show all 6 ]
Probe for Locus
CDO1319
Locus
[ Hide all but 1 of 7 ] Xcdo1319A Xcdo1319B cdo1319a cdo1319b CDO1319A CDO1319B cdo1319
Synonym
Synonym HAR35_22873
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
Type
cDNA
Sequence
BE439302 BE439321 CDO1319_WHE05G01.s1 CDO1319_WHE05G07.s1
Polymorphism
CDO1319 EcoRV
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
PCR size
1.1
GrainGenes Marker Report: cdo1319a
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