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GrainGenes Marker Report: cdo57c

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Locus
cdo57c
Type
RFLP
Map
Oat-2001-KxM_220
Oat-KxO/2003-16_2332
[ Show Nearby Loci ]
Map Data
Oat, KxO, 2003
Oat-2001-KxM
Probe
CDO57
Remark
Marker placement value = 1.00 cM on map Oat-KxO/2003-16_23
Marker is not a framework marker on map Oat-KxO/2003-16_23
Possible Orthologs
[ Hide all but 1 of 29 ]
CDO057
CDO57
CDO57(A)
CDO57(B)
CDO057A
cdo57a
CDO057B
cdo57b
CDO057b-5H
cdo57d
Xcdo57
Xcdo57-2
Xcdo57-2A
Xcdo57-5A
Xcdo57-5D
Xcdo57-7A
Xcdo57.3
Xcdo57A
Xcdo57B
Xcdo57C
Xcdo57D
Xcnl.CDO57
CDO57A
CDO57B
CDO57D
CDO57C
cdo57
cdo57-5A
cdo57-5B



Probe for Locus
CDO57
Locus
Xcdo57-2
[ Show all 33 ]
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
ReferenceHeun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library
OatUni-ZAPXR [c]
Type
cDNA
Sequence
BQ548073
BQ548072
CDO57-5
CDO57-3
Polymorphism
CDO57 EcoRV
CDO57 EcoRI
CDO57 XbaI
Linkage Group
7L,5L [b 2S]
Insert Enzyme
EcoRI
XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.6
PCR size
1.6