Query (optional)   in Class  

GrainGenes Marker Report: gpa (Hordeum)

[Submit comment/correction]

Gene
gpa (Hordeum)
Full Name
Grandpa
Synonym
Synonymgp (Hordeum)
Referencevon Wettstein-Knowles P (1993) Barley (Hordeum vulgare) 2N = 14. Genetic maps: Locus Maps of Complex Genomes.
Gene Class
Grandpa
Locus
CDO036
gpa
Chromosome
2H
Data Source
Franckowiak, Jerome D.96.10



Locus Associated with Gene
CDO036
Type
RFLP
Synonym
Synonymgpa (Hordeum)
Chromosome
2H
Map
[ Hide all but 1 of 8 ]
Barley-ConsensusFHB-2H151.2
Hordeum-Bins-2H165.8
Hordeum-Consensus2005-SNP-2H146.489
Hordeum-Consensus2007-SSR-2H144.83
Hordeum-QTLConsensus-Abiotic-2H146.49
Hordeum-QTLConsensus-Agronomic-2H146.49
Hv-Consensus2006-Marcel-2H144.83
Hv-Integrated2009-2H140.5
[ Show Nearby Loci ]
Map Data
Barley, Abiotic QTL Consensus
[ Show all 8 ]
Species
Hordeum vulgare
Probe
CDO36
Associated Gene
gpa (Hordeum)
Gene Class
Grandpa
Reference
ReferenceVarshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
ReferenceRostoks N et al. (2005) Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress. Molecular Genetics and Genomics 274:515-527.
ReferenceKleinhofs A (1997) Integrating Barley RFLP and Classical Marker Maps: Barley Genetics Newsletter 27:105.
Remark
Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb'
Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Oregon Wolfe Barleys
Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Oregon Wolfe Dom x Rec
Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
CDO36
[ Show all 22 ]



Locus Associated with Gene
gpa
Map
Hordeum-Bins-2H166
Hordeum-Genes2-2H-103
[ Show Nearby Loci ]
Map Data
Barley genes 2
Barley, BinMap 2005
Associated Gene
gpa (Hordeum)
Gene Class
Grandpa
Data Source
Kleinhofs, Andris
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin



Locus
gpa (Hordeum)
Synonym
SynonymCDO036

GrainGenes is a product of the Agricultural Research Service of the US Department of Agriculture.