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GrainGenes Marker Report: k00074

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Locus	k00074
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 39.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak11h14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/T SNP structure (UNICODE) = CAATGGTGTGYAGACACAGGT Parent 1 SNP sequence = CAATGGTGTGCAGACACAGGT Parent 2 SNP sequence = CAATGGTGTGTAGACACAGGT SNP = T/G SNP structure (UNICODE) = CGGAGAAGAAKGCTTCAAGGT Parent 1 SNP sequence = CGGAGAAGAATGCTTCAAGGT Parent 2 SNP sequence = CGGAGAAGAAGGCTTCAAGGT
Probe for Locus	baak11h14
Locus	k00074
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBb0085F13.6 [Oryza sativa (japonica cultivar-group)] emb CAE04613.2 OSJNBb0004G23.11 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ACCTTTCTGCCAACCTAGCA Right 5' - AACCTCAAGGCAAAAAGGGT
Sequence	AV910952
PCR size	366