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GrainGenes Marker Report: k00150

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Locus	k00150
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 92.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak16e20
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/G SNP structure (UNICODE) = TTCAAAAGTGRGAAAATACCA Parent 1 SNP sequence = TTCAAAAGTGAGAAAATACCA Parent 2 SNP sequence = TTCAAAAGTGGGAAAATACCA SNP = G/C SNP structure (UNICODE) = AATTCTGCTTSGGCTGTTCCG Parent 1 SNP sequence = AATTCTGCTTGGGCTGTTCCG Parent 2 SNP sequence = AATTCTGCTTCGGCTGTTCCG
Probe for Locus	baak16e20
Locus	k00150
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative RNA polymerase [Oryza sativa (japonica cultivar-group)] gb AAO73277.1 putative RNA polymerase [Oryza sativa (japonica cultivar-gro
Type	PCR
PCR primers	Left 5' - AAGCCTACATACAGGAGGCG Right 5' - GTGAACCAGATGCTCCCAAC
Sequence	BJ455313
PCR size	460