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GrainGenes Marker Report: k00219

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Locus	k00219
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 325.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak1a17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/C SNP structure (UNICODE) = CAGGGGGCAGMGTCATAAGAT Parent 1 SNP sequence = CAGGGGGCAGAGTCATAAGAT Parent 2 SNP sequence = CAGGGGGCAGCGTCATAAGAT SNP = T/C SNP structure (UNICODE) = AGCACTATAAYCGTCCGAAAC Parent 1 SNP sequence = AGCACTATAATCGTCCGAAAC Parent 2 SNP sequence = AGCACTATAACCGTCCGAAAC
Probe for Locus	baak1a17
Locus	k00219
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = unknown protein [Arabidopsis thaliana] gb AAO63895.1 unknown protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - ACTGAAACCACATGCTGCTG Right 5' - GCTTGTAAGCCAAGTCCACG
Sequence	AV910596
PCR size	432