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GrainGenes Marker Report: k00230

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Locus	k00230
Type	CAPS
Chromosome	4H
Map	Hv-HNxH602-4H 40.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak19m23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = EcoRI SNP = T/C SNP structure (UNICODE) = GTGCTGAATTYATGTTTCAGC Parent 1 SNP sequence = GTGCTGAATTTATGTTTCAGC Parent 2 SNP sequence = GTGCTGAATTCATGTTTCAGC Recognized sequence for CAPs locus = GAATTC
Probe for Locus	baak19m23
Locus	k00230
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CACATTGTACAACGCCAAGG Right 5' - AGCACCTCCTCCAGTCATTG
Sequence	BJ456118
PCR size	417