Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: k00250

[Submit comment/correction]

Locus	k00250
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 169.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak21a04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/T SNP structure (UNICODE) = TTTGAGCATAKCTAACAGTGA Parent 1 SNP sequence = TTTGAGCATAGCTAACAGTGA Parent 2 SNP sequence = TTTGAGCATATCTAACAGTGA SNP = G/A SNP structure (UNICODE) = GGGGAGGTCCRGCGCACCCTC Parent 1 SNP sequence = GGGGAGGTCCGGCGCACCCTC Parent 2 SNP sequence = GGGGAGGTCCAGCGCACCCTC
Probe for Locus	baak21a04
Locus	k00250
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ThiJ-like protein [Brassica rapa subsp. pekinensis]
Type	PCR
PCR primers	Left 5' - ATTCATATGCTGCTGGAGGC Right 5' - TGACACTCTGGAGGCAACAG
Sequence	BJ461860
PCR size	407