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GrainGenes Marker Report: k00360

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Locus	k00360
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 71.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak26j14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/C SNP structure (UNICODE) = GGAGTCCCCGMCGCAATCTTT Parent 1 SNP sequence = GGAGTCCCCGACGCAATCTTT Parent 2 SNP sequence = GGAGTCCCCGCCGCAATCTTT SNP = G/A SNP structure (UNICODE) = GTCACCTGTCRGTCACTCTGT Parent 1 SNP sequence = GTCACCTGTCGGTCACTCTGT Parent 2 SNP sequence = GTCACCTGTCAGTCACTCTGT
Probe for Locus	baak26j14
Locus	k00360
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Golgi SNARE 12 protein / Golgi SNAP receptor complex member 1 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - AGATCAAGCTGCGGTCAACT Right 5' - CTCCGTCTCCACAAGGTGAT
Sequence	BJ457185
PCR size	355