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GrainGenes Marker Report: k00373

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Locus	k00373
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 225.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak21o03
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/T SNP structure (UNICODE) = CTTCAGTACTKAAGTTAAACA Parent 1 SNP sequence = CTTCAGTACTGAAGTTAAACA Parent 2 SNP sequence = CTTCAGTACTTAAGTTAAACA SNP = C/A SNP structure (UNICODE) = GCATGCTGGAMTACTACTACT Parent 1 SNP sequence = GCATGCTGGACTACTACTACT Parent 2 SNP sequence = GCATGCTGGAATACTACTACT
Probe for Locus	baak21o03
Locus	k00373
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0470A12.14 [Oryza sativa (japonica cultivar-group)] dbj BAB90288.1 P0470A12.14 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ACTCCTCCATTTACCGGGTC Right 5' - GAGGTGCTGACAGAGCAGAA
Sequence	BJ462102
PCR size	384