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GrainGenes Marker Report: k00391

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Locus	k00391
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 116.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak2b06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 28 ] SNP = C/T SNP structure (UNICODE) = TCAATTTGATYGATCATTTCC Parent 1 SNP sequence = TCAATTTGATCGATCATTTCC Parent 2 SNP sequence = TCAATTTGATTGATCATTTCC SNP = A/C SNP structure (UNICODE) = ACACTAGACCMAGGTAAAGTC Parent 1 SNP sequence = ACACTAGACCAAGGTAAAGTC Parent 2 SNP sequence = ACACTAGACCCAGGTAAAGTC SNP structure (UNICODE) = GAATGAGGACMACGCGATGGG Parent 1 SNP sequence = GAATGAGGACAACGCGATGGG Parent 2 SNP sequence = GAATGAGGACCACGCGATGGG SNP structure (UNICODE) = AACAAAAAGAMGCACCATCTA Parent 1 SNP sequence = AACAAAAAGAAGCACCATCTA Parent 2 SNP sequence = AACAAAAAGACGCACCATCTA SNP = A/G SNP structure (UNICODE) = ATCATTTCCTRAAAAAAATTG Parent 1 SNP sequence = ATCATTTCCTAAAAAAAATTG Parent 2 SNP sequence = ATCATTTCCTGAAAAAAATTG SNP structure (UNICODE) = ACTGGAAGAGRAGTACCTCTC Parent 1 SNP sequence = ACTGGAAGAGAAGTACCTCTC Parent 2 SNP sequence = ACTGGAAGAGGAGTACCTCTC SNP structure (UNICODE) = TCTGGATTGARAAAGAATGAG Parent 1 SNP sequence = TCTGGATTGAAAAAGAATGAG Parent 2 SNP sequence = TCTGGATTGAGAAAGAATGAG SNP = G/A SNP structure (UNICODE) = ACGCGATGGGRGAGAAGGAAC Parent 1 SNP sequence = ACGCGATGGGGGAGAAGGAAC Parent 2 SNP sequence = ACGCGATGGGAGAGAAGGAAC
Probe for Locus	baak2b06
Locus	k00391
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - ATCCATGCTTTCATCCTTGG Right 5' - ATCGAGCTACTGACGAGGGA
Sequence	AV911913
PCR size	388