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GrainGenes Marker Report: k00448

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Locus	k00448
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 257.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak28n19
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = CGAAGCTGCCRCCAGGGTAGA Parent 1 SNP sequence = CGAAGCTGCCGCCAGGGTAGA Parent 2 SNP sequence = CGAAGCTGCCACCAGGGTAGA SNP = C/G SNP structure (UNICODE) = CGAGGCCACCSTCGCTGAAGA Parent 1 SNP sequence = CGAGGCCACCCTCGCTGAAGA Parent 2 SNP sequence = CGAGGCCACCGTCGCTGAAGA
Probe for Locus	baak28n19
Locus	k00448
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = chlorophyll a/b binding protein
Type	PCR
PCR primers	Left 5' - TGCTAAGAGACGGTGCATTG Right 5' - AATCAGGCCAGACAATTTGC
Sequence	BQ659999
PCR size	391