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GrainGenes Marker Report: k00544

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Locus	k00544
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 36.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak32l14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/G SNP structure (UNICODE) = CTAGCACTCARGTTCCGAGGA Parent 1 SNP sequence = CTAGCACTCAAGTTCCGAGGA Parent 2 SNP sequence = CTAGCACTCAGGTTCCGAGGA SNP = T/C SNP structure (UNICODE) = CCTGCTACCGYGAAAGGGCCG Parent 1 SNP sequence = CCTGCTACCGTGAAAGGGCCG Parent 2 SNP sequence = CCTGCTACCGCGAAAGGGCCG
Probe for Locus	baak32l14
Locus	k00544
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CTTCTGGAGGCGTAATTTGC Right 5' - TGGAGAAACAGGAGCGATCT
Sequence	BJ458612
PCR size	428