GrainGenes Marker Report: k00591
Locus
k00591
Type
CAPS
Chromosome
1H
Map
Hv-HNxH602-1H 313.9
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
baak36b12
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = BcnI SNP = G/A SNP structure (UNICODE) = GGAGCTCCGGRCGCACGAAGT Parent 1 SNP sequence = GGAGCTCCGGGCGCACGAAGT Parent 2 SNP sequence = GGAGCTCCGGACGCACGAAGT Recognized sequence for CAPs locus = CCSGG
Probe for Locus
baak36b12
Locus
k00591
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = putative ketol-acid reductoisomerase [Oryza sativa (japonica cultivar-group)]
Type
PCR
PCR primers
Left 5' - CGAGACATCAAATCGCACAC
Right 5' - GGATCCAAGCTACTGGGACA
Sequence
BJ483806
PCR size
482
GrainGenes Marker Report: k00591
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
| |||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
| ||||||||
|
|