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GrainGenes Marker Report: k00608

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Locus	k00608
Type	CAPS
Chromosome	7H
Map	Hv-HNxH602-7H 294.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak38f04
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = HapII SNP = T/G SNP structure (UNICODE) = CCCCCTCGCCKGCTCTTCTCC Parent 1 SNP sequence = CCCCCTCGCCTGCTCTTCTCC Parent 2 SNP sequence = CCCCCTCGCCGGCTCTTCTCC Recognized sequence for CAPs locus = CCGG
Probe for Locus	baak38f04
Locus	k00608
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GGAACGGAGGGAGTACATCA Right 5' - CAGAGCAGCCTATCGAGGTC
Sequence	AV934793
PCR size	356