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GrainGenes Marker Report: k00692

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Locus	k00692
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 71.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak41p21
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/G SNP structure (UNICODE) = TGGAGGAGACSGTGTCAGCAA Parent 1 SNP sequence = TGGAGGAGACCGTGTCAGCAA Parent 2 SNP sequence = TGGAGGAGACGGTGTCAGCAA SNP = A/G SNP structure (UNICODE) = TGTAGATCTCRTCAATAAGAG Parent 1 SNP sequence = TGTAGATCTCATCAATAAGAG Parent 2 SNP sequence = TGTAGATCTCGTCAATAAGAG
Probe for Locus	baak41p21
Locus	k00692
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = eukaryotic translation initiation factor 3 subunit 5 / eIF-3 epsilon / eIF3f (TIF3F1) [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - AAATCACGACGAGTTGGCAT Right 5' - CAAGTCGTTGGAGGAGAAGC
Sequence	BJ460729
PCR size	467