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GrainGenes Marker Report: k00720

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Locus	k00720
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 16.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak43j24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = C/G SNP structure (UNICODE) = GCCAGTTGATSCCTGCCAACA Parent 1 SNP sequence = GCCAGTTGATCCCTGCCAACA Parent 2 SNP sequence = GCCAGTTGATGCCTGCCAACA SNP = A/T SNP structure (UNICODE) = CCACACTGAAWTTCATACCTC Parent 1 SNP sequence = CCACACTGAAATTCATACCTC Parent 2 SNP sequence = CCACACTGAATTTCATACCTC
Probe for Locus	baak43j24
Locus	k00720
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ferredoxin-NADP(H) oxidoreductase [Triticum aestivum]
Type	PCR
PCR primers	Left 5' - TTCCACTGCTGTGTGATGGT Right 5' - CAATTCGAGGATGGCAACTT
Sequence	BJ458167
PCR size	371