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GrainGenes Marker Report: k00863

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Locus	k00863
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 226.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak4k13
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/G SNP structure (UNICODE) = GCTCACTTGCKTTTCAGTGTG Parent 1 SNP sequence = GCTCACTTGCTTTTCAGTGTG Parent 2 SNP sequence = GCTCACTTGCGTTTCAGTGTG SNP = G/A SNP structure (UNICODE) = GGAGGTCGCCRAACGTCTTGG Parent 1 SNP sequence = GGAGGTCGCCGAACGTCTTGG Parent 2 SNP sequence = GGAGGTCGCCAAACGTCTTGG
Probe for Locus	baak4k13
Locus	k00863
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0086O06.10 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ATACACACACACCCAAGGCA Right 5' - AAGGTCTTGAATGCAGGGG
Sequence	AV912613
PCR size	351