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GrainGenes Marker Report: k00952

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Locus	k00952
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 169.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal12h24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/G SNP structure (UNICODE) = TGATTGACACRCATCTGATCA Parent 1 SNP sequence = TGATTGACACACATCTGATCA Parent 2 SNP sequence = TGATTGACACGCATCTGATCA SNP = A/C SNP structure (UNICODE) = TAGGTGATATMTTCCTTTTGG Parent 1 SNP sequence = TAGGTGATATATTCCTTTTGG Parent 2 SNP sequence = TAGGTGATATCTTCCTTTTGG
Probe for Locus	baal12h24
Locus	k00952
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative copia-type polyprotein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CGGGCATTAAACGGTTACAA Right 5' - AGAACCCATGTGAATCAGGC
Sequence	BJ473437
PCR size	378