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GrainGenes Marker Report: k01017

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Locus	k01017
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 172.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal19j09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = N/G SNP structure (UNICODE) = GAAAGTCAGAN/GGAGACCATCA Parent 1 SNP sequence = GAAAGTCAGANGAGACCATCA Parent 2 SNP sequence = GAAAGTCAGAGGAGACCATCA SNP = A/- SNP structure (UNICODE) = GGTTCTTGGCA/-GACTCCGGAC Parent 1 SNP sequence = GGTTCTTGGCAGACTCCGGAC Parent 2 SNP sequence = GGTTCTTGGC-GACTCCGGAC
Probe for Locus	baal19j09
Locus	k01017
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TTTTTGAAGCAAAGCCAACC Right 5' - GAGGAAGATCCAGGAAAGCA
Sequence	BJ474209
PCR size	356