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GrainGenes Marker Report: k01026

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Locus	k01026
Type	CAPS
Chromosome	5H
Map	Hv-HNxH602-5H 161
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal18m24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 13 ] Restriction enzyme used for CAPS analysis = EcoRV SNP = C/- SNP structure (UNICODE) = CTGCAGCCCCC/-TGCCTNCAGA Parent 1 SNP sequence = CTGCAGCCCCCTGCCTNCAGA Parent 2 SNP sequence = CTGCAGCCCC-TGCCTNCAGA SNP = G/N SNP structure (UNICODE) = TGCTCCAGCGG/NCTTGACCACC Parent 1 SNP sequence = TGCTCCAGCGGCTTGACCACC Parent 2 SNP sequence = TGCTCCAGCGNCTTGACCACC SNP = C/G SNP structure (UNICODE) = TTGAGCTTGGSCACCTCGATG Parent 1 SNP sequence = TTGAGCTTGGCCACCTCGATG Parent 2 SNP sequence = TTGAGCTTGGGCACCTCGATG
Probe for Locus	baal18m24
Locus	k01026
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - AACAGGGATGTCGAAACAGC Right 5' - GACAGGATGACGAGCCATTT
Sequence	AV919871
PCR size	448