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GrainGenes Marker Report: k01119

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Locus	k01119
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 84.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal22c17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/A SNP structure (UNICODE) = ACATTGTTTAWTGTGACAAAT Parent 1 SNP sequence = ACATTGTTTATTGTGACAAAT Parent 2 SNP sequence = ACATTGTTTAATGTGACAAAT SNP = G/T SNP structure (UNICODE) = ACCCACAAAAKCCTCCAATTA Parent 1 SNP sequence = ACCCACAAAAGCCTCCAATTA Parent 2 SNP sequence = ACCCACAAAATCCTCCAATTA
Probe for Locus	baal22c17
Locus	k01119
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = probable aminopeptidase F24D7.4 [imported] - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - CAACTTCTGGCGACACTTCA Right 5' - TGCATGGCTTTACTGATGGA
Sequence	BJ474758
PCR size	376