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GrainGenes Marker Report: k01125

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Locus	k01125
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 301
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal27m11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = G/A SNP structure (UNICODE) = ACAGTATATCRCACGAGAAAA Parent 1 SNP sequence = ACAGTATATCGCACGAGAAAA Parent 2 SNP sequence = ACAGTATATCACACGAGAAAA SNP = G/C SNP structure (UNICODE) = GCTGGCCTGTSGCACCATTCG Parent 1 SNP sequence = GCTGGCCTGTGGCACCATTCG Parent 2 SNP sequence = GCTGGCCTGTCGCACCATTCG SNP structure (UNICODE) = TGTCTGCAGARTGATTCTCCA Parent 1 SNP sequence = TGTCTGCAGAGTGATTCTCCA Parent 2 SNP sequence = TGTCTGCAGAATGATTCTCCA
Probe for Locus	baal27m11
Locus	k01125
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = P0007F06.15 [Oryza sativa (japonica cultivar-group)] dbj BAB84376.1 P0007F06.15 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - CAAATGGGAGCGAGCTATGT Right 5' - GTTCGGCTTCAGGAACCTTT
PCR size	442