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GrainGenes Marker Report: k01161

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Locus	k01161
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 259.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal32n15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/T SNP structure (UNICODE) = TCTATGTCTGWTCCAACCTGC Parent 1 SNP sequence = TCTATGTCTGATCCAACCTGC Parent 2 SNP sequence = TCTATGTCTGTTCCAACCTGC SNP = A/G SNP structure (UNICODE) = TCTCGTTCTCRTTAGCCAGTT Parent 1 SNP sequence = TCTCGTTCTCATTAGCCAGTT Parent 2 SNP sequence = TCTCGTTCTCGTTAGCCAGTT
Probe for Locus	baal32n15
Locus	k01161
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0071I13.18 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - GGTTGAAGCAAACCGAACAT Right 5' - AAGGTGTACAAGGAGGCTCG
Sequence	BJ547951
PCR size	470