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GrainGenes Marker Report: k01219

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Locus	k01219
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 180.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal32h09
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 15 ] SNP = T/N SNP structure (UNICODE) = ACTTGGCCAGT/NGGTCACAGCA Parent 1 SNP sequence = ACTTGGCCAGTGGTCACAGCA Parent 2 SNP sequence = ACTTGGCCAGNGGTCACAGCA SNP = T/C SNP structure (UNICODE) = CACCACCTGAYCATCAGATTG Parent 1 SNP sequence = CACCACCTGATCATCAGATTG Parent 2 SNP sequence = CACCACCTGACCATCAGATTG SNP structure (UNICODE) = CCGAGTCCGGT/NTGATTCTGGC Parent 1 SNP sequence = CCGAGTCCGGTTGATTCTGGC Parent 2 SNP sequence = CCGAGTCCGGNTGATTCTGGC SNP = G/A SNP structure (UNICODE) = GATTCTGGCGRGCTCCTGCTC Parent 1 SNP sequence = GATTCTGGCGGGCTCCTGCTC Parent 2 SNP sequence = GATTCTGGCGAGCTCCTGCTC
Probe for Locus	baal32h09
Locus	k01219
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TGGACTGAGTTACGTTCCCC Right 5' - TCTACTACGCCAGCCAGGAC
Sequence	AV935030
PCR size	410