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GrainGenes Marker Report: k01237

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Locus	k01237
Type	CAPS
Chromosome	1H
Map	Hv-HNxH602-1H 264
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal2j10
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = TspRI SNP = A/T SNP structure (UNICODE) = TTACATGTCCWCTGTGTCTGC Parent 1 SNP sequence = TTACATGTCCACTGTGTCTGC Parent 2 SNP sequence = TTACATGTCCTCTGTGTCTGC Recognized sequence for CAPs locus = CASTGNN
Probe for Locus	baal2j10
Locus	k01237
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TGACATGAATCCGACGAAAA Right 5' - GCGTTTCAGGTGGAGAAGG
Sequence	AV935019
PCR size	415