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GrainGenes Marker Report: k01252

Locus	k01252
Type	CAPS
Chromosome	1H
Map	Hv-HNxH602-1H 79.5
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal38l23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = DdeI SNP = T/A SNP structure (UNICODE) = TGGGTGAGCCWGAGCCGCGAA Parent 1 SNP sequence = TGGGTGAGCCTGAGCCGCGAA Parent 2 SNP sequence = TGGGTGAGCCAGAGCCGCGAA Recognized sequence for CAPs locus = CTNAG
Probe for Locus	baal38l23
Locus	k01252
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - AAGGTGCAGAACCGAAACAG Right 5' - CATCATCACCAAGATCACCG
Sequence	BJ477347
PCR size	403