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GrainGenes Marker Report: k01254

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Locus	k01254
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 29.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal39h14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/C SNP structure (UNICODE) = AGATCAAAACYGCTTTATTTA Parent 1 SNP sequence = AGATCAAAACTGCTTTATTTA Parent 2 SNP sequence = AGATCAAAACCGCTTTATTTA SNP = A/C SNP structure (UNICODE) = TACATGAAGAMACACAGTGAT Parent 1 SNP sequence = TACATGAAGAAACACAGTGAT Parent 2 SNP sequence = TACATGAAGACACACAGTGAT
Probe for Locus	baal39h14
Locus	k01254
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative RNA splicing protein [Oryza sativa]
Type	PCR
PCR primers	Left 5' - AAGGGGCCGAATTATTTTTG Right 5' - ACGGACATAGGTCAAATCCG
Sequence	BJ477036
PCR size	389