GrainGenes Marker Report: k01316
Locus
k01316
Type
SNP
Chromosome
6H
Map
Hv-HNxH602-6H 94.7
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
baal3h14
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 7 ] SNP = G/A SNP structure (UNICODE) = CACACAAAAGRGGAACCTAGG Parent 1 SNP sequence = CACACAAAAGGGGAACCTAGG Parent 2 SNP sequence = CACACAAAAGAGGAACCTAGG SNP structure (UNICODE) = ATGCAACTAARATATTGTCAG Parent 1 SNP sequence = ATGCAACTAAGATATTGTCAG Parent 2 SNP sequence = ATGCAACTAAAATATTGTCAG
Probe for Locus
baal3h14
Locus
k01316
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = putative clathrin coat assembly protein AP17 [Oryza sativa (japonica cultivar-group)]
Type
PCR
PCR primers
Left 5' - ATTTTGAGTGGAGCACCCAG
Right 5' - GCATAGATGCAAGGGGGTTA
PCR size
379
GrainGenes Marker Report: k01316
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