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GrainGenes Marker Report: k01527

Locus	k01527
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 142.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal9e05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = A/G SNP structure (UNICODE) = GTAAAATGCCRGCGCGTCTAC Parent 1 SNP sequence = GTAAAATGCCAGCGCGTCTAC Parent 2 SNP sequence = GTAAAATGCCGGCGCGTCTAC SNP = C/T SNP structure (UNICODE) = TGCCCCACCAYTTGCGCTTGG Parent 1 SNP sequence = TGCCCCACCACTTGCGCTTGG Parent 2 SNP sequence = TGCCCCACCATTTGCGCTTGG SNP = A/C SNP structure (UNICODE) = TGCCACCGGCMCTGCCGCCGC Parent 1 SNP sequence = TGCCACCGGCACTGCCGCCGC Parent 2 SNP sequence = TGCCACCGGCCCTGCCGCCGC
Probe for Locus	baal9e05
Locus	k01527
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative myosin [Oryza sativa (japonica cultivar-group)] gb AAL31066.1 putative myosin [Oryza sativa]
Type	PCR
PCR primers	Left 5' - CATCCAGCAGAACAAACACG Right 5' - CAAGTCCAAGGCTGAGAAGG
Sequence	AV833019
PCR size	367