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GrainGenes Marker Report: k01965

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Locus	k01965
Type	CAPS
Chromosome	2H
Map	Hv-HNxH602-2H 110.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags10k08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = MseI SNP = C/T SNP structure (UNICODE) = CACATAGACTYAATGCCCCGT Parent 1 SNP sequence = CACATAGACTCAATGCCCCGT Parent 2 SNP sequence = CACATAGACTTAATGCCCCGT Recognized sequence for CAPs locus = TTAA
Probe for Locus	bags10k08
Locus	k01965
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GCTTTGCATTCCAAGATGGT Right 5' - AGGTCCAAGATGGAGGAGGT
Sequence	AV833898
PCR size	413