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GrainGenes Marker Report: k01989

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Locus	k01989
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 146.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags10k14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/T SNP structure (UNICODE) = ACCACAAAATKGATTTATGTT Parent 1 SNP sequence = ACCACAAAATGGATTTATGTT Parent 2 SNP sequence = ACCACAAAATTGATTTATGTT SNP = T/A SNP structure (UNICODE) = AGTTTGATAGWTCACTGGCTA Parent 1 SNP sequence = AGTTTGATAGTTCACTGGCTA Parent 2 SNP sequence = AGTTTGATAGATCACTGGCTA
Probe for Locus	bags10k14
Locus	k01989
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = RNase Z [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TGTCAGGCAATTGCAACATT Right 5' - GGTACACGCTCCCAACTGAT
Sequence	AV917608
PCR size	465