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GrainGenes Marker Report: k02119

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Locus	k02119
Type	CAPS
Chromosome	1H
Map	Hv-HNxH602-1H 250
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags15e08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = BsmAI SNP = C/T SNP structure (UNICODE) = CATTTTGTCTYTTGTTTTCTC Parent 1 SNP sequence = CATTTTGTCTCTTGTTTTCTC Parent 2 SNP sequence = CATTTTGTCTTTTGTTTTCTC Recognized sequence for CAPs locus = GTCTCN
Probe for Locus	bags15e08
Locus	k02119
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CGTTCGGTTCTTCATCCTTC Right 5' - TCGCTCAAACAATCATCAGC
Sequence	AV920709
PCR size	457