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GrainGenes Marker Report: k02169

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Locus	k02169
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 141.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags15j20
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/T SNP structure (UNICODE) = TGGCACCTGTWGGGAAAAGGA Parent 1 SNP sequence = TGGCACCTGTAGGGAAAAGGA Parent 2 SNP sequence = TGGCACCTGTTGGGAAAAGGA SNP = A/G SNP structure (UNICODE) = GTACAAAACARGAATCTCCCT Parent 1 SNP sequence = GTACAAAACAAGAATCTCCCT Parent 2 SNP sequence = GTACAAAACAGGAATCTCCCT
Probe for Locus	bags15j20
Locus	k02169
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = T2E6.19 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - ACGCCTAGACGGTGTTCAAT Right 5' - AGGAGCTCATGCGCTAGAAG
Sequence	AV920797
PCR size	362