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GrainGenes Marker Report: k02195

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Locus	k02195
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 24.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags16g18
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/C SNP structure (UNICODE) = CTCGCGGACGYACCCACCATT Parent 1 SNP sequence = CTCGCGGACGTACCCACCATT Parent 2 SNP sequence = CTCGCGGACGCACCCACCATT SNP = T/A SNP structure (UNICODE) = CAGGTCTGGGWTTGCCAGGAA Parent 1 SNP sequence = CAGGTCTGGGTTTGCCAGGAA Parent 2 SNP sequence = CAGGTCTGGGATTGCCAGGAA
Probe for Locus	bags16g18
Locus	k02195
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = 12-oxophytodienoic acid reductase [Oryza sativa] emb CAD89604.1 oxo-phytodienoic acid reductase [Oryza sativa (japonica
Type	PCR
PCR primers	Left 5' - CGAAACAAGGATGGGAGAAG Right 5' - ACAAGTCTATGACGGAGGCG
Sequence	AV920991
PCR size	376