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GrainGenes Marker Report: k02363

Locus	k02363
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 34
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags1o08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/T SNP structure (UNICODE) = AGGACCCATGKGTGATGCATT Parent 1 SNP sequence = AGGACCCATGGGTGATGCATT Parent 2 SNP sequence = AGGACCCATGTGTGATGCATT SNP = A/G SNP structure (UNICODE) = TGAAGACTAGRCTGACAGCAG Parent 1 SNP sequence = TGAAGACTAGACTGACAGCAG Parent 2 SNP sequence = TGAAGACTAGGCTGACAGCAG
Probe for Locus	bags1o08
Locus	k02363
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = AT5g13390/T22N19_40 [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GCAATTGCAGGACAGGAAAT Right 5' - CCCAAGAATGCAGTGGAGAT
Sequence	AV921294
PCR size	388