GrainGenes Marker Report: k02432
Locus
k02432
Type
SNP
Chromosome
3H
Map
Hv-HNxH602-3H 110
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
bags20o06
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 7 ] SNP = T/C SNP structure (UNICODE) = TTTTCTCCTGYACTCTAGCTG Parent 1 SNP sequence = TTTTCTCCTGTACTCTAGCTG Parent 2 SNP sequence = TTTTCTCCTGCACTCTAGCTG SNP structure (UNICODE) = GTGCCGGACAYCGCTGTTGTT Parent 1 SNP sequence = GTGCCGGACATCGCTGTTGTT Parent 2 SNP sequence = GTGCCGGACACCGCTGTTGTT
Probe for Locus
bags20o06
Locus
k02432
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = putative myosin heavy chain-like protein [Oryza sativa (japonica cultivar-group)]
Type
PCR
PCR primers
Left 5' - GTTTACGACGGCCAGTGAAT
Right 5' - GGTAGGAGGGGTCATCGTTT
Sequence
AV834011
PCR size
374
GrainGenes Marker Report: k02432
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